Sequence (5' to 3'): GGGAUCUGUCACCCCAUUGAUCGCCUUCGGGCUGAUCUGGCUGG
CUAGGCGGGUCCC

Puzzle: 7SK

Crystal structure kindly provided by: Anne-Catherine Dock-Bregeon

Reference: Martinez-Zapien D, Legrand P, McEwen AG, Proux F, Cragnolini T, Pasquali S, Dock-Bregeon AC. The crystal structure of the 5΄ functional domain of the transcription riboregulator 7SK. Nucleic Acids Res. 2017 Apr 7;45(6):3568-3579. doi: 10.1093/nar/gkw1351. Bourbigot S, Dock-Bregeon AC, Eberling P, Coutant J, Kieffer B, Lebars I. Solution structure of the 5'-terminal hairpin of the 7SK small nuclear RNA. RNA. 2016 Dec;22(12):1844-1858. Epub 2016 Oct 20.

PDB id: 5lys 5lyu 5lyv 5iem

raw prediction | Assessment results

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