Sequence (5’ to 3’): AUCGCUGAACGCGGGGGACCCAGGGGGCGAAUCUCUUCCGAAAGGAAGAGUAGG GUUACUCCUUCGACCCGAGCCCGUCAGCUAACCUCGCAAGCGUCCGAAGGAGAA AAA

Puzzle: ydaO riboswitch.

Crystal structure kindly provided by: Dinshaw Patel

Reference: Ren A, Patel DJ. 2014. c-di-AMP binds the ydaO riboswitch in two pseudo-symmetry-related pockets. Nat Chem Biol. 10(9):780-6.

PDB id: 4qlm

Puzzle Submission/Deadline: 2014.06.28/07.15

raw prediction | Assessment results